Razib Khan One-stop-shopping for all of my content

September 16, 2011

Not the great stagnation

Filed under: Genetics,Genome Sequencing,Genomics,Personal genomics,Sequencing — Razib Khan @ 12:13 am

Dan MacArthur points me to this story on the sequencing of the West family. You can read the full paper in PLoS Genetics. When the price point for a full genome comes down to $1,000 or so I plan on getting the code for everyone in my immediate family, just like I got everyone genotyped (the latter was cheaper, but a full genome is a much richer data set for intra-familial comparison).

I generated the chart from the figures quoted in the article about the cost of full genome sequencing. I’m moderately familiar with this trend, but it still boggles my mind that we’ve shifted two orders of magnitude in four years! Nice to know that in some domains progress continues.

July 13, 2010

Genomic liftoff

Filed under: Genomics,Sequencing,Whole Genome Sequencing — Razib Khan @ 1:27 am

The firm GenomeQuest has a blog, and on that blog they have a post, Implications of exponential growth of global whole genome sequencing capacity. In that post there are some bullet points with numbers. Here they are:

* 2001-2009: A Human Genome

* 2010: 1,000 Genomes – Learning the Ropes

* 2011: 50,000 Genomes – Clinical Flirtation

* 2012: 250,000 Genomes – Clinical Early Adoption

* 2013: 1 Million Genomes – Consumer Awareness

* 2014: 5 Million Genomes – Consumer Reality

* 2015-2020: 25 Million Genomes And Beyond – A Brave New World

Let’s transform these projections into charts.



Of course GenomeQuest sells analytics tools for the tsunami of genomic data which they see cresting. Though if only 25,000,000 people have whole genome sequenced by the year 2020, I’m not sure if we’ll feel that it’s a “tsunami” of data at that point. I’m sure there would be plenty of stories about the “sequencing gap” between different communities, by class and race and what not. But what do you think about GenomeQuest’s projections?

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