{"id":100865,"date":"2017-12-11T02:09:38","date_gmt":"2017-12-11T10:09:38","guid":{"rendered":"https:\/\/gnxp.nofe.me\/?p=190588"},"modified":"2017-12-11T02:09:38","modified_gmt":"2017-12-11T10:09:38","slug":"open-thread-12-11-2017","status":"publish","type":"post","link":"https:\/\/www.razib.com\/wordpress\/2017\/12\/11\/open-thread-12-11-2017\/","title":{"rendered":"Open Thread, 12\/11\/2017"},"content":{"rendered":"<p><a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B005254HPC\/geneexpressio-20\"><img loading=\"lazy\" decoding=\"async\" class=\"alignleft size-full wp-image-190589\" src=\"http:\/\/gnxp.nofe.me\/wp-content\/uploads\/2017\/12\/turksinworldhistory.jpeg\" alt=\"\" width=\"180\" height=\"270\" \/><\/a>Thinking back to <a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B005254HPC\/geneexpressio-20\">The Turks in World History<\/a> the author points out that even the most explicit Islamic of the late Turkic empires, that of the Ottomans, persisted with a customary law similar and cognate to the Mongol <i>yasa<\/i>. Perhaps then the folkway of the nomadic Turk was sublimated and integrated into the Islamic superstructure of the Ottoman ruling ideology?<\/p>\n<p>I went to a work-related Christmas party thrown by my company&#8217;s law firm. There were a lot of VC guys there. Two of them confused me for a blockchain entrepreneur\u00a0(one of them was asking about a conflict with the CFO). I think I better get into blockchain&#8230;.<\/p>\n<p><a href=\"https:\/\/everydayfeminism.com\/2017\/12\/intersectional-feminist-first-date\/\"><img loading=\"lazy\" decoding=\"async\" class=\"alignright size-full wp-image-190590\" src=\"http:\/\/gnxp.nofe.me\/wp-content\/uploads\/2017\/12\/problematic.jpg\" alt=\"\" width=\"300\" height=\"194\" \/><\/a>So the website <a href=\"https:\/\/everydayfeminism.com\/2017\/12\/intersectional-feminist-first-date\/\">Everyday Feminism<\/a> has an <a href=\"https:\/\/everydayfeminism.com\/2017\/12\/intersectional-feminist-first-date\/\">article<\/a>, <a href=\"https:\/\/everydayfeminism.com\/2017\/12\/intersectional-feminist-first-date\/\">10 Things Every Intersectional Feminist Should Ask On a First Date<\/a>. I only know about this website because of conservative Twitter. <b>It could be that 90% or more of the hits on this website are through viral &#8220;hate-clicks&#8221;.<\/b><\/p>\n<p>Second, I feel the image that goes along with the article is <strong>problematic<\/strong> as fuck. The woman pictured seems to be geared toward appealing to cishet male norms of &#8220;attractiveness.&#8221; On the other hand, if intersectional feminists typically look something like <a href=\"https:\/\/en.wikipedia.org\/wiki\/Josie_Maran#\/media\/File:Josie_Maran.jpg\">Josie Maran<\/a>&#8230;well, I won&#8217;t go there.<\/p>\n<p>I will observe also that I find out about a lot of far-right movements and individuals through Left and Centrist Twitter (the two groups are interested for different reasons).<\/p>\n<p>As noted in the comments, <a href=\"https:\/\/www.nature.com\/articles\/s41598-017-17124-4\">The Irish DNA Atlas: Revealing Fine-Scale Population Structure and History within Ireland<\/a>. At this point, I think I can say this: <b>unless it&#8217;s ancient DNA I&#8217;m done with the historical genetics of the British Isles.<\/b> We know enough. Period.<\/p>\n<p><a href=\"https:\/\/www.politico.com\/magazine\/story\/2017\/12\/10\/yoffe-sexual-harassment-college-franken-216057\">Why the #MeToo Movement Should Be Ready for a Backlash<\/a>. I don&#8217;t care too much about Al Franken, but digging a little deeper I think there might be some dirty tricks going on there&#8230;. I was rather dim on the prospects for Republicans in 2018, but at this rate, the Dems might &#8220;struggle-session&#8221; their way into defeat.<\/p>\n<p><a href=\"https:\/\/www.technologyreview.com\/s\/609118\/india-warily-eyes-ai\/?utm_campaign=Technology+Review&amp;utm_source=twitter.com&amp;utm_medium=social&amp;utm_content=2017-12-10\">India Warily Eyes AI: Technology outsourcing has been India\u2019s only reliable job creator in the past 30 years. Now artificial intelligence threatens to wipe out those gains<\/a>. When I believed in the <a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B003DYGOQO\/geneexpressio-20\">End of History and the Last Man<\/a> this would matter to me. Now it&#8217;s all a big shrug.<\/p>\n<p><a href=\"https:\/\/www.biorxiv.org\/content\/early\/2017\/12\/10\/211789\">The ancestral animal genetic toolkit revealed by diverse choanoflagellate transcriptomes<\/a>.<\/p>\n<p>Another reason that helper-AIs can&#8217;t come to medicine soon enough:<\/p>\n<blockquote class=\"twitter-tweet\" data-lang=\"en\">\n<p dir=\"ltr\" lang=\"en\">A striking example of doctor&#8217;s cognitive bias <a href=\"https:\/\/t.co\/OK68MORKSP\">https:\/\/t.co\/OK68MORKSP<\/a><br \/>\nvia <a href=\"https:\/\/twitter.com\/BacaMotes?ref_src=twsrc%5Etfw\">@BacaMotes<\/a> (mis)diagnosis of heart attack in the ER d\/t age partitioning <a href=\"https:\/\/t.co\/KCtxOTVmWR\">pic.twitter.com\/KCtxOTVmWR<\/a><\/p>\n<p>\u2014 Eric Topol (@EricTopol) <a href=\"https:\/\/twitter.com\/EricTopol\/status\/939930330873528320?ref_src=twsrc%5Etfw\">December 10, 2017<\/a><\/p>\n<\/blockquote>\n<p><script async src=\"https:\/\/platform.twitter.com\/widgets.js\" charset=\"utf-8\"><\/script><\/p>\n<p><a href=\"https:\/\/apnews.com\/cdc0567f7bf34958b914b15869392a84?utm_campaign=SocialFlow&amp;utm_source=Twitter&amp;utm_medium=AP\">Chronicler of Islamic State \u2018killing machine\u2019 goes public<\/a>.<\/p>\n<p><a href=\"https:\/\/www.cnbc.com\/2017\/12\/10\/dna-tests-can-reveal-paternity-surprises.html?__source=sharebar|twitter&amp;par=sharebar\">As home DNA tests become more common, people must grapple with surprises about their parents<\/a>:<\/p>\n<blockquote>\n<p>Until recently, Andrea Ramirez, 43, thought she was part Mexican.<\/p>\n<p>But the results from an at-home genetic test from 23andMe revealed that she is a mix of Northern European, North African and a little Native American.<\/p>\n<p>And not at all hispanic.<\/p>\n<\/blockquote>\n<p>There can be no genetic test for being Hispanic because that is a socio-cultural identity. There are Korean, Arab, and Nordic Hispanics. Even the most common genetic profile varies, from mostly European Argentines to mostly indigenous Bolivians to Afro-Cubans and Afro-Colombians.<\/p>\n<p>When I read stuff like this I really wonder what they teach journalists (the Census explicitly declaims the the idea that Hispanic is a racial category).<\/p>\n<p>I spent a fair amount of time this weekend cleaning up scripts that can batch process <a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B01LZ5K87Z\/geneexpressio-20\">23andMe<\/a>, <a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B00TRLVKW0\/geneexpressio-20\">Ancestry<\/a> and <a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B072K6PGRF\/geneexpressio-20\">FamilyTree DNA<\/a> input files and push them down the pipeline toward generating admixture percentages. I have posted the <a href=\"https:\/\/docs.google.com\/spreadsheets\/d\/124F0p1foJpnSt2DJcmo_cgxhq1sht34WLErxU9TJuRw\/edit#gid=1109543936\">most current results<\/a> from the <a href=\"https:\/\/gnxp.nofe.me\/2017\/12\/02\/south-asian-genotype-project\/\">South Asian Genotype Project<\/a> have been posted.<\/p>\n<p>Two things<\/p>\n<p>1) I&#8217;m not happy with the clusters that I used. I may change them (in which case I&#8217;ll rerun everything).<br \/>\n2) Once I&#8217;ve done that I&#8217;ll probably send some of my scripts to Zack Ajmal and he can run all the Harappa individuals with this new cluster.<\/p>\n<p>Finally, <b>people from the &#8220;Cow Belt&#8221; don&#8217;t get genotyped.<\/b> No submissions from UP or Bihar so far. Very frustrating.<\/p>\n<p>The word <a href=\"https:\/\/trends.google.com\/trends\/explore?q=problematic&amp;geo=US&amp;date=all#TIMESERIES\">problematic<\/a> is problematic in my opinion. I really want to punch people when they use that word. But I&#8217;ve lost that battle.<\/p>\n<p>My friend Chad Niederhuth is starting his plant genomics lab at Michigan State. He&#8217;s looking for <a href=\"http:\/\/niederhuthlab.com\/openings\/\">graduate students and postdocs<\/a>.<\/p>\n<p>My friend Nathan Pearson&#8217;s HLA genomics start-up, <a href=\"http:\/\/rootdeep.com\/\">Root<\/a> is out of stealth mode.<\/p>\n<p><a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B01J6RPGKG\/geneexpressio-20\"><img loading=\"lazy\" decoding=\"async\" class=\"alignleft size-full wp-image-190597\" src=\"http:\/\/gnxp.nofe.me\/wp-content\/uploads\/2017\/12\/kindle1.jpeg\" alt=\"\" width=\"299\" height=\"299\" \/><\/a>Looking at my Kindle stack wondering about which of these five books to tackle next:<\/p>\n<ul>\n<li><a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B00J6YBOFQ\/geneexpressio-20\">Zero to One: Notes on Startups, or How to Build the Future<\/a>. I admire Peter Thiel much more than I did a few years ago.<\/li>\n<li><a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B00KFG18Q4\/geneexpressio-20\">To Explain the World: The Discovery of Modern Science<\/a>. I enjoyed reading <a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B001F0PYX2\/geneexpressio-20\">The First Three Minutes<\/a>, but generally am out of sync with Weinberg&#8217;s full-throated scientism when I hear his public pronouncements. But that&#8217;s OK, I read people I disagree with.<\/li>\n<li><a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B018E7HFNK\/geneexpressio-20\">Venomous: How Earth&#8217;s Deadliest Creatures Mastered Biochemistry<\/a>. Real biology and chemistry. Sometimes I miss them.<\/li>\n<li><a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B00H5ZN2Z8\/geneexpressio-20\">The Transformation of the World: A Global History of the Nineteenth Century<\/a>. This has been in my stack for a <b>long<\/b> time (3.5 years).<\/li>\n<li><a href=\"https:\/\/www.amazon.com\/exec\/obidos\/ASIN\/B071W7JCKW\/geneexpressio-20\">The Rise and Fall of American Growth: The U.S. Standard of Living since the Civil War<\/a>.<\/li>\n<\/ul>\n<p><a class=\"a2a_button_facebook\" href=\"https:\/\/www.addtoany.com\/add_to\/facebook?linkurl=https%3A%2F%2Fgnxp.nofe.me%2F2017%2F12%2F11%2Fopen-thread-12-11-2017%2F&amp;linkname=Open%20Thread%2C%2012%2F11%2F2017\" title=\"Facebook\" rel=\"nofollow noopener\" ><\/a><a class=\"a2a_button_twitter\" href=\"https:\/\/www.addtoany.com\/add_to\/twitter?linkurl=https%3A%2F%2Fgnxp.nofe.me%2F2017%2F12%2F11%2Fopen-thread-12-11-2017%2F&amp;linkname=Open%20Thread%2C%2012%2F11%2F2017\" title=\"Twitter\" rel=\"nofollow noopener\" ><\/a><a class=\"a2a_button_google_plus\" href=\"https:\/\/www.addtoany.com\/add_to\/google_plus?linkurl=https%3A%2F%2Fgnxp.nofe.me%2F2017%2F12%2F11%2Fopen-thread-12-11-2017%2F&amp;linkname=Open%20Thread%2C%2012%2F11%2F2017\" title=\"Google+\" rel=\"nofollow noopener\" ><\/a><a class=\"a2a_dd addtoany_share_save\" href=\"https:\/\/www.addtoany.com\/share#url=https%3A%2F%2Fgnxp.nofe.me%2F2017%2F12%2F11%2Fopen-thread-12-11-2017%2F&amp;title=Open%20Thread%2C%2012%2F11%2F2017\" data-a2a-url=\"https:\/\/gnxp.nofe.me\/2017\/12\/11\/open-thread-12-11-2017\/\" data-a2a-title=\"Open Thread, 12\/11\/2017\"><\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Thinking back to The Turks in World History the author points out that even the most explicit Islamic of the late Turkic empires, that of the Ottomans, persisted with a customary law similar and cognate to the Mongol yasa. Perhaps then the folkway of the nomadic Turk was sublimated and integrated into the Islamic superstructure [&hellip;]<\/p>\n","protected":false},"author":12,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[189],"tags":[],"class_list":["post-100865","post","type-post","status-publish","format-standard","hentry","category-open-thread"],"_links":{"self":[{"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/posts\/100865","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/users\/12"}],"replies":[{"embeddable":true,"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/comments?post=100865"}],"version-history":[{"count":1,"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/posts\/100865\/revisions"}],"predecessor-version":[{"id":100866,"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/posts\/100865\/revisions\/100866"}],"wp:attachment":[{"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/media?parent=100865"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/categories?post=100865"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.razib.com\/wordpress\/wp-json\/wp\/v2\/tags?post=100865"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}